formatSpectraData.Rd
Formats sensor information into a dataframe suitable for input into database
formatSpectraData( name, type, readout, lambda_max, values_max, lambda_min, values_min, sensor_midpoint, lambda1_recommended, lambda2_recommended )
name | Character string. The name of the sensor |
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type | The type of sensor. One of: redox, pH, pLigand |
readout | The readout of the sensor. One of: exitation ratiometric, emission ratiometric |
lambda_max | The lambda values corresponding to the emission in the maximum state (corresponding to Rmax) |
values_max | The emission values in the maximum state (corresponding to Rmax--so, deprotenated or oxidized or not bound to ligand) |
lambda_min | The lambda values corresponding to the emission in the minimum state (corresponding to Rmin) |
values_min | The emission values in the minimum state (corresponding to Rmin--so, protenated or reduced or bound to ligand) |
sensor_midpoint | Numeric. The midpoint of the sensor. Depending on your sensor, this could be: e0, pKa, log-midpoint |
A list object suitable to be pushed to the mongo database